Well, there are no classes for direct timer access in the current version of .NET Micro Framework, mainly due to the fact that the managed (C#) code is interpreted and running considerably slowly than native (C++) code. IIRC simple pin toggling loop on Netduino gen. 1 can achieve ~10 kHz. Even if you were able to access the timers, you would not have much time to run managed code in the interrupt handler (if at all).
What do you want to do?