Let me try to clear up any confusion...
There are pins on the STM32F405RG that are unused in the Netduino design (i.e. PA4, PA5, PC8, PC9,...). I wish to wire up to these pins, however, they are not defined in the Netduino.Pins enumeration and therefore I have no way to control those pins. Does anyone know how I can modify the software/firmware to get access to those STM32F4 pins?